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Oršolić, Davor; Pehar, Vesna; Šmuc, Tomislav; Stepanić, Višnja (2021) Comprehensive machine learning based study of the chemical space of herbicides. Scientific reports, 11 . ISSN 2045-2322
Cichońska, Anna; Ravikumar, Balaguru; Allaway, Robert J.; Wan, Fangping; Park, Sungjoon; Isayev, Olexandr; Li, Shuya; Mason, Michael; Lamb, Andrew; Tanoli, Ziaurrehman; Jeon, Minji; Kim, Sunkyu; Popova, Mariya; Capuzzi, Stephen; Zeng, Jianyang; Dang, Kristen; Koytiger, Gregory; Kang, Jaewoo; Wells, Carrow I.; Willson, Timothy M.; Oršolić, Davor; Lučić, Bono; Stepanić, Višnja; Šmuc, Tomislav; Oprea, Tudor I.; Schlessinger, Avner; Drewry, David H.; Stolovitzky, Gustavo; Wennerberg, Krister; Guinney, Justin; Aittokallio, Tero (2021) Crowdsourced mapping of unexplored target space of kinase inhibitors. Nature communications, 12 . ISSN 2041-1723
Matulja, Dario; Grbčić, Petra; Bojanić, Krunoslav; Topić Popović, Natalija; Čož-Rakovac, Rozelindra; Laclef, Sylvain; Šmuc, Tomislav; Jović, Ozren; Marković, Dean; Pavelić, Sandra Kraljević (2021) Chemical Evaluation, Antioxidant, Antiproliferative, Anti-Inflammatory and Antibacterial Activities of Organic Extract and Semi-Purified Fractions of the Adriatic Sea Fan, Eunicella cavolini. Molecules, 26 (19). ISSN 1420-3049
Vlainić, Josipa; Jović, Ozren; Kosalec, Ivan; Vugrek, Oliver; Čož-Rakovac, Rozelindra; Šmuc, Tomislav (2021) In Vitro Confirmation of Siramesine as a Novel Antifungal Agent with In Silico Lead Proposals of Structurally Related Antifungals. Molecules, 26 . pp. 3504-3520. ISSN 1420-3049
Jović, Ozren; Šmuc, Tomislav (2021) Search for Novel Lead Inhibitors of Yeast Cytochrome bc1, from Drugbank and COCONUT. Molecules, 26 (14). ISSN 1420-3049
Mihelčić, Matej; Šmuc, Tomislav (2021) Approaches for Multi-View Redescription Mining. IEEE access, 9 . pp. 19356-19378. ISSN 2169-3536
Kulikovskikh, Ilona; Lipić, Tomislav; Šmuc, Tomislav (2020) From Knowledge Transmission to Knowledge Construction: A Step towards Human-Like Active Learning. Entropy (Basel. Online), 22 (8). ISSN 1099-4300
Jović, Ozren; Šmuc, Tomislav (2020) Combined Machine Learning and Molecular Modelling Workflow for the Recognition of Potentially Novel Fungicides. Molecules, 25 (9). ISSN 1420-3049
Piškorec, Matija; Šmuc, Tomislav; Šikić, Mile (2019) Disentangling Sources of Influence in Online Social Networks. IEEE Access, 7 . pp. 131692-131704. ISSN 2169-3536
Vidulin, Vedrana; Šmuc, Tomislav; Džeroski, Sašo; Supek, Fran (2018) The evolutionary signal in metagenome phyletic profiles predicts many gene functions. Microbiome, 6 . ISSN 2049-2618
Mihelčić, Matej; Džeroski, Sašo; Lavrač, Nada; Šmuc, Tomislav (2017) A framework for redescription set construction. Expert Systems with Applications, 68 . pp. 196-215. ISSN 0957-4174
Vidulin, Vedrana; Šmuc, Tomislav; Supek, Fran (2016) Extensive complementarity between gene function prediction methods. Bioinformatics, 32 (23). pp. 3645-3653. ISSN 1367-4803
Brbić, Maria; Piškorec, Matija; Vidulin, Vedrana; Kriško, Anita; Šmuc, Tomislav; Supek, Fran (2016) The landscape of microbial phenotypic traits and associated genes. Nucleic Acids Research . ISSN 0305-1048
Antulov-Fantulin, Nino; Lančić, Alen; Šmuc, Tomislav; Štefančić, Hrvoje; Šikić, Mile (2015) Identification of Patient Zero in Static and Temporal Networks : Robustness and Limitations. Physical Review Letters, 114 . pp. 248701-1. ISSN 0031-9007
Piškorec, Matija; Antulov-Fantulin, Nino; Kralj Novak, Petra; Mozetič, Igor; Grčar, Miha; Vodenska, Irena; Šmuc, Tomislav (2014) Cohesiveness in financial news and its relation to market volatility. Scientific Reports, 4 . 5038/1-5038/8. ISSN 2045-2322
Gamberger, Dragan; Šmuc, Tomislav (2013) Good Governance Problems and Recent Financial Crises in Some EU Countries. Economics-The Open Access Open-Assessment E-Journal, 7 . ISSN 1864-6042
Levatić, Jurica; Džeroski, Sašo; Supek, Fran; Šmuc, Tomislav (2013) Semi-Supervised Learning for Quantitative Structure- Activity Modeling. Informatica (Ljubljana), 37 (2). pp. 173-179. ISSN 0350-5596
Škunca, Nives; Bošnjak, Matko; Kriško, Anita; Panov, Panče; Džeroski, Sašo; Šmuc, Tomislav; Supek, Fran (2012) Phyletic Profiling With Cliques of Orthologs is Enhanced by Signatures of Paralogy Relationships. Plos computational biology, 9 (1). ISSN 1553-734X
Supek, Fran; Bošnjak, Matko; Škunca, Nives; Šmuc, Tomislav (2011) REVIGO summarizes and visualizes long lists of Gene Ontology terms. PLoS ONE, 6 (7). e21800/1-e21800/9. ISSN 1932-6203
Čož-Rakovac, Rozelinda; Lisičić, Duje; Šmuc, Tomislav; Topić Popović, Natalija; Strunjak-Perović, Ivančica; Jadan, Margita; Tadić, Zoran; Jug Dujaković, Jurica (2011) Classification modelling of physiological stages in captive Balkan whip snakes using blood biochemistry parameters. Journal of Herpetology, 45 (4). pp. 525-529. ISSN 0022-1511
Čož-Rakovac, Rozelinda; Topić Popović, Natalija; Šmuc, Tomislav; Strunjak-Perović, Ivančica; Jadan, Margita (2009) Classification accuracy of algorithms for blood chemistry data of three aquaculture-influenced marine fish species. Fish Physiology and Biochemistry, 35 (4). pp. 641-647. ISSN 0920-1742
Čož-Rakovac, Rozelinda; Šmuc, Tomislav; Topić Popović, Natalija; Strunjak-Perović, Ivančica; Hacmanjek, Mato; Jadan, Margita (2008) Novel methods for assesing fish blood biochemical data. Journal of Applied Ichthyology, 24 (1). pp. 77-80. ISSN 0175-8659
Čož-Rakovac, Rozelinda; Strunjak-Perović, Ivančica; Topić Popović, Natalija; Hacmanjek, Mato; Šmuc, Tomislav; Jadan, Margita; Lipej, Zoran; Homen, Zlatko (2008) Cage culture effects on mullets (Mugilidae) liver histology and blood chemistry profile. Journal of Fish Biology, 72 (10). pp. 2557-2569. ISSN 0022-1112
Trontl, Krešimir; Pevec, Dubravko; Šmuc, Tomislav (2008) Machine learning of the reactor core loading pattern critical parameters. Science and Technology of Nuclear Installations, 2008 . ISSN 1687-6075
Antulov-Fantulin, Nino; Lančić, Alen; Štefančić, Hrvoje; Šikić, Mile; Šmuc, Tomislav (2014) Statistical inference framework for source detection of contagion processes on arbitrary network structures. In: Proceedings of 2014 IEEE Eighth International Conference on Self-Adaptive and Self-Organizing Systems Workshops2014 IEEE Eighth International Conference on Self-Adaptive and Self-Organizing Systems. London, IEEE, pp. 78-83 .
Grubišić,, Ivan / I.G.; Lipić, Tomislav; Mesić, Benjamin; Šmuc, Tomislav BricksND - Benchmark for disentangled concept learning. In: 5th International Workshop on Data Science (IWDS 2020) (24 November 2020 - 24 November 2020) Virtual. (Unpublished)
Antulov-Fantulin, Nino; Lančić, Alen; Štefančić, Hrvoje; Šmuc, Tomislav; Šikić, Mile (2014) Supporting Data and Code: Detectability limits of epidemic sources in networks. [Dataset] (Unpublished)