Items where Author is "Tomić, Sanja"

Article

Tomić, Antonija; Karačić, Zrinka; Tomić, Sanja (2023) Influence of Mutations of Conserved Arginines on Neuropeptide Binding in the DPP III Active Site. Molecules, 28 (4). ISSN 1420-3049

Zonjić, Iva; Tumir, Lidija-Marija; Crnolatac, Ivo; Šupljika, Filip; Racané, Livio; Tomić, Sanja; Radić Stojković, Marijana (2022) Recognition of ATT Triplex and DNA:RNA Hybrid Structures by Benzothiazole Ligands. Biomolecules, 12 (3). ISSN 2218-273X

Tomić, Antonija; Tomić, Sanja (2022) Demystifying DPP III Catalyzed Peptide Hydrolysis-Computational Study of the Complete Catalytic Cycle of Human DPP III Catalyzed Tynorphin Hydrolysis. International journal of molecular sciences, 23 (3). ISSN 1422-0067)

Zonjić, Iva; Tumir, Lidija-Marija; Crnolatac, Ivo; Šupljika, Filip; Racané, Livio; Tomić, Sanja; Radić Stojković, Marijana (2022) Recognition of ATT Triplex and DNA:RNA Hybrid Structures by Benzothiazole Ligands. Biomolecules, 12 (3). ISSN 2218-273X

Matić, Sara; Tomašić Paić, Ana; Sobočanec, Sandra; Pinterić, Marija; Pipalović, Goran; Martinčić, Monika; Matovina, Mihaela; Tomić, Sanja (2022) Interdisciplinary study of the effects of dipeptidyl-peptidase III cancer mutations on the KEAP1-NRF2 signaling pathway. International journal of molecular sciences, 23 (4). ISSN 1422-0067

Karačić, Zrinka; Šupljika, Filip; Tomić, Antonija; Brkljačić, Lidija; Tomašić Paić, Ana; Čehić, Mirsada; Tomić, Sanja (2022) Neuropeptides, substrates and inhibitors of human dipeptidyl peptidase III, experimental and computational study — A new substrate identified. International journal of biological macromolecules, 220 . pp. 1390-1401. ISSN 0141-8130

Lončar, Borka; Perin, Nataša; Mioč, Marija; Boček, Ida; Grgić, Lea; Kralj, Marijeta; Tomić, Sanja; Radić Stojković, Marijana; Hranjec, Marijana (2021) Novel amino substituted tetracyclic imidazo[4,5-b]pyridine derivatives: Design, synthesis, antiproliferative activity and DNA/RNA binding study. European journal of medicinal chemistry, 217 . ISSN 0223-5234

Ferger, Matthias; Ban, Željka; Krošl, Ivona; Tomić, Sanja; Dietrich, Lena; Lorenzen, Sabine; Rauch, Florian; Sieh, Daniel; Friedrich, Alexandra; Griesbeck, Stefaine; Kenđel, Adriana; Miljanić, Snežana; Piantanida, Ivo; Marder, Todd B. (2021) Aryl-diyne linkers in bis-triarylborane cations control fluorimetric and Raman sensing of various DNA and RNA. Chemistry : a European journal, 27 . pp. 5142-5159. ISSN 0947-6539

Trnski, Diana; Sabol, Maja; Tomić, Sanja; Štefanac, Ivan; Mrčela, Milanka; Musani, Vesna; Rinčić, Nikolina; Kurtović, Matea; Petrić, Tina; Levanat, Sonja; Ozretić, Petar (2021) SHH-N non-canonically sustains androgen receptor activity in androgen-independent prostate cancer cells. Scientific reports, 11 (1). ISSN 2045-2322

Ban, Željka; Karačić, Zrinka; Tomić, Sanja; Amini, Hashem; Marder, Todd B.; Piantanida, Ivo (2021) Triarylborane Dyes as a Novel Non‐Covalent and Non‐Inhibitive Fluorimetric Markers for DPP III Enzyme. Molecules, 26 . ISSN 1420-3049

Agić, Dejan; Karnaš, Maja; Šubarić, Domagoj; Lončarić, Melita; Tomić, Sanja; Karačić, Zrinka; Bešlo, Drago; Rastija, Vesna; Molnar, Maja; Popović, Boris M.; Lisjak, Miroslav (2021) Coumarin derivatives act as novel inhibitors of human dipeptidyl peptidase III: combined in vitro and in silico study. Pharmaceuticals, 14 (6). ISSN 1424-8247

Ban, Željka; Griesbeck, Stefanie; Tomić, Sanja; Nitsch, Jörn; Marder, Todd; Piantanida, Ivo (2020) A quadrupolar bis‐triarylborane chromophore as a fluorimetric and chirooptic probe for simultaneous and selective sensing of DNA, RNA and proteins. Chemistry - A European Journal, 26 . pp. 2195-2203. ISSN 0947-6539

Tomić, Antonija; Horvat, Gordan; Ramek, Michael; Agić, Dejan; Brkić, Hrvoje; Tomić, Sanja (2019) New zinc ion parameters suitable for classical MD simulations of zinc metallo-peptidases. Journal of Chemical Information and Modeling, 59 (8). pp. 3437-3453. ISSN 1549-9596

Šmidlehner, Tamara; Karačić, Zrinka; Tomić, Sanja; Schmuck, Carsten; Piantanida, Ivo (2018) Fluorescent cyanine-guanidiniocarbonyl-pyrrole conjugate with pH-dependent DNA/RNA recognition and DPP III fluorescent labelling and inhibition properties. Monatshefte für Chemie, 149 (7). pp. 1307-1313. ISSN 0026-9247

Sabljić, Igor; Tomin, Marko; Matovina, Mihaela; Sučec, Iva; Tomašić Paić, Ana; Tomić, Antonija; Abramić, Marija; Tomić, Sanja (2018) The first dipeptidyl peptidase III from a thermophile: Structural basis for thermal stability and reduced activity. PLoS One, 13 (2). ISSN 1932-6203

Tomin, Marko; Tomić, Antonija; Kovačević, Borislav; Tomić, Sanja (2018) The Mechanism of Peptide Hydrolysis Catalysed by Dipeptidyl Peptidase III from Bacteroides thetaiotaomicron. Croatica chemica acta, 91 (2). pp. 187-193. ISSN 0011-1643

Kazazić, Saša; Karačić, Zrinka; Sabljić, Igor; Agić, Dejan; Tomin, Marko; Abramić, Marija; Dadlez, Michal; Tomić, Antonija; Tomić, Sanja (2018) Conservation of the conformational dynamics and ligand binding within M49 enzyme family. RSC Advances, 8 (24). pp. 13310-13322. ISSN 2046-2069

Hromić-Jahjefendić, Altijana; Jajčanin Jozić, Nina; Kazazić, Saša; Grabar Branilović, Marina; Karačić, Zrinka; Schrittwieser, Jörg H.; Krishna Mohan, Padmanabha Das; Tomin, Marko; Oberer, Monika; Gruber, Karl; Abramić, Marija; Tomić, Sanja (2017) A novel Porphyromonas gingivalis enzyme: An atypical dipeptidyl peptidase III with an ARM repeat domain. PLoS One, 12 (11). ISSN 1932-6203

Tomin, Marko; Tomić, Sanja (2017) Dynamic properties of dipeptidyl peptidase III from Bacteroides thetaiotaomicron and the structural basis for its substrate specificity – a computational study. Molecular BioSystems, 13 . pp. 2407-2417. ISSN 1742-206X

Matovina, Mihaela; Agić, Dejan; Abramić, Marija; Matić, Sara; Karačić, Zrinka; Tomić, Sanja (2017) New findings about human dipeptidyl peptidase III based on mutations found in cancer. RSC Advances, 7 (58). pp. 36326-36334. ISSN 2046-2069

Gundić, Mario; Tomić, Antonija; Wade, Rebecca C.; Matovina, Mihaela; Karačić, Zrinka; Kazazić, Saša; Tomić, Sanja (2016) Human DPP III – Keap1 Interactions : A Combined Experimental And Computational study. Croatica Chemica Acta, 89 (2). pp. 217-228. ISSN 0011-1643

Tomić, Antonija; Kovačević, Borislav; Tomić, Sanja (2016) Concerted nitrogen inversion and hydrogen bonding to Glu451 are responsible for protein-controlled suppression of the reverse reaction in the human DPP III. Physical Chemistry Chemical Physics, 18 (39). pp. 27245-27256. ISSN 1463-9076

Smolko, Ana; Šupljika, Filip; Martinčić, Jelena; Jajčanin Jozić, Nina; Grabar Branilović, Marina; Tomić, Sanja; Ludwig-Müller, Jutta; Piantanida, Ivo; Salopek Sondi, Branka (2016) The role of conserved Cys residues in Brassica rapa auxin amidohydrolase: Cys139 is crucial for the enzyme activity and Cys320 regulates enzyme stability. Physical Chemistry Chemical Physics, 18 (13). pp. 8890-8900. ISSN 1463-9076

González-García, Jorge; Tomić, Sanja; Lopera, Alberto; Guijarro, Lluís; Piantanida, Ivo; García-España, Enrique (2015) Aryl-bis-(scorpiand)-aza receptors differentiate between nucleotide monophosphates by a combination of aromatic, hydrogen bond and electrostatic interactions. Organic and Biomolecular Chemistry, 13 (6). pp. 1732-1740. ISSN 1477-0520

Rastija, Vesna; Agić, Dejan; Tomić, Sanja; Nikolić, Sonja; Hranjec, Marijana; Karminski-Zamola, Grace; Abramić, Marija (2015) Synthesis, QSAR, and molecular dynamics simulation of amidino-substituted benzimidazoles as dipeptidyl peptidase III inhibitors. Acta Chimica Slovenica, 62 (4). pp. 867-878. ISSN 1318-0207

Aleksić, Maja; Bertoša, Branimir; Nhili, Raja; Depauw, Sabine; Martin-Kleiner, Irena; David-Cordonnier, Marie-Helene; Tomić, Sanja; Kralj, Marijeta; Karminski-Zamola, Grace (2014) Anilides and quinolones with nitrogen-bearing substituents from benzothiophene- and thienothiophene- series: synthesis, photochemical synthesis, cytostatic evaluation, 3D-derived QSAR analysis and DNA-binding properties. European Journal of Medicinal Chemistry, 71 . pp. 267-281. ISSN 0223-5234

Grabar Branilović, Marina; Maršalevski, A.; Tomić, Antonija; Tomić, Sanja (2013) Nobelova nagrada za kemiju 2013. Kemija u industriji, 62 (11-12). pp. 468-470. ISSN 0022-9830

Radić Stojković, Marijana; Škugor, Marko; Tomić, Sanja; Grabar, Marina; Smrečki, Vilko; Dudek, Lukasz; Grolik, Jaroslaw; Eilmes, Julita; Piantanida, Ivo (2013) Dibenzotetraaza[14]annulene – adenine conjugate recognizes complementary poly dT among ss-DNA / ss-RNA sequences. Organic and Biomolecular Chemistry, 11 (24). pp. 4077-4085. ISSN 1477-0520

Grabar Branilović, Marina; Maršalevski, Aleksandra; Tomić, Antonija; Tomić, Sanja (2013) Nobelova nagrada za kemiju za 2013. godinu. Kemija u industriji, 62 (11-12). pp. 468-471. ISSN 0022-9830

Špoljarić, Jasminka; Tomić, Antonija; Vukelić, Bojana; Salopek Sondi, Branka; Agić, Dejan; Tomić, Sanja; Abramić, Marija (2011) Human Dipeptidyl Peptidase III: the Role of Asn406 in Ligand Binding and Hydrolysis. Croatica Chemica Acta, 84 (2). pp. 259-268. ISSN 0011-1643

Tumir, Lidija-Marija; Grabar, Marina; Tomić, Sanja; Piantanida, Ivo (2010) The interactions of bis-phenanthridinium – nucleobase conjugates with nucleotides: adenine conjugate recognizes UMP in aqueous medium. Tetrahedron, 66 (13). pp. 2501-2513. ISSN 0040-4020

Šikić, Mile; Tomić, Sanja; Vlahoviček, Kristian (2009) Prediction of Protein-Protein Interaction Sites in Sequences and 3D Structures by Random Forests. Plos computational biology, 5 (1). e1000278-1. ISSN 1553-734X

Mihel, Josip; Šikić, Mile; Tomić, Sanja; Jeren, Branko; Vlahoviček, Kristian (2008) PSAIA - Protein Structure and Interaction Analyzer. BMC STRUCTURAL BIOLOGY, 8 . ISSN 1472-6807

Ramek, Michael; Tomić, Sanja (2004) Ab initio Hartree-Fock investigation of 2-methylindole-3-acetic acid. Croatica Chemica Acta, 77 (1-2). pp. 371-376. ISSN 0011-1643

Tomić, Sanja; Wade, Rebecca C. (2001) COMBINE analysis of nuclear receptor-DNA binding specificity: Comparison of two sets of data. Croatica Chemica Acta, 74 (2). pp. 295-314. ISSN 0011-1643

Tomić, Sanja; Dobovičnik, Vladimir; Šunjić, Vitomir; Kojić-Prodić, Biserka (2001) Enantioselectivity of Pseudomonas cepacia lipase towards 2-methyl-3(or 4)-arylalkanols: An approach based on the stereoelectronic theory and molecular modeling. Croatica Chemica Acta, 74 (2). pp. 343-357. ISSN 0011-1643

Tomić, Sanja; Ramek, Michael; Kojić-Prodić, Biserka (1998) Combined ab initio SCF and molecular mechanics studies of propionic and isobutyric acids and their indole derivatives related to the phytohormone auxin (indole-3-acetic acid). Croatica Chemica Acta, 71 (3). pp. 511-525. ISSN 0011-1643