Items where Author is "Supek, Fran"

Vidulin, Vedrana; Šmuc, Tomislav; Džeroski, Sašo; Supek, Fran (2018) The evolutionary signal in metagenome phyletic profiles predicts many gene functions. Microbiome, 6 . ISSN 2049-2618

Park, Solip; Supek, Fran; Lehner, Ben (2018) Systematic discovery of germline cancer predisposition genes through the identification of somatic second hits. Nature Communications, 9 (1). p. 2601. ISSN 2041-1723

Levatić, Jurica; Pavić, Kristina; Perković, Ivana; Uzelac, Lidija; Ester, Katja; Kralj, Marijeta; Kaiser, Marcel; Rottmann, Matthias; Supek, Fran; Zorc, Branka (2018) Machine learning prioritizes synthesis of primaquine ureidoamides with high antimalarial activity and attenuated cytotoxicity. European Journal of Medicinal Chemistry, 146 . pp. 651-667. ISSN 0223-5234

Vidulin, Vedrana; Šmuc, Tomislav; Supek, Fran (2016) Extensive complementarity between gene function prediction methods. Bioinformatics, 32 (23). pp. 3645-3653. ISSN 1367-4803

Brbić, Maria; Piškorec, Matija; Vidulin, Vedrana; Kriško, Anita; Šmuc, Tomislav; Supek, Fran (2016) The landscape of microbial phenotypic traits and associated genes. Nucleic Acids Research . ISSN 0305-1048

Brbić, Maria; Warnecke, Tobias; Kriško, Anita; Supek, Fran (2015) Global shifts in genome and proteome composition are very tightly coupled. Genome Biology and Evolution, 7 (6). pp. 1519-1532. ISSN 1759-6653

Supek, Fran; Lehner, Ben; Hajkova, Petra; Warnecke, Tobias (2014) Hydroxymethylated Cytosines Are Associated with Elevated C to G Transversion Rates. PLoS Genetics, 10 (9). e1004585. ISSN 1553-7390

Vidović, Anita; Supek, Fran; Nikolić, Andrea; Kriško, Anita (2014) Signatures of conformational stability and oxidation resistance in proteomes of pathogenic bacteria. Cell Reports, 7 (5). pp. 1393-1400. ISSN 2211-1247

Kriško, Anita; Copić, Tea; Gabaldon, Toni; Lehner, Ben; Supek, Fran (2014) Inferring gene function from evolutionary change in signatures of translation efficiency. Genome Biology, 15 (3). R44-1. ISSN 1465-6906

Levatić, Jurica; Džeroski, Sašo; Supek, Fran; Šmuc, Tomislav (2013) Semi-Supervised Learning for Quantitative Structure- Activity Modeling. Informatica (Ljubljana), 37 (2). pp. 173-179. ISSN 0350-5596

Škunca, Nives; Bošnjak, Matko; Kriško, Anita; Panov, Panče; Džeroski, Sašo; Šmuc, Tomislav; Supek, Fran (2012) Phyletic Profiling With Cliques of Orthologs is Enhanced by Signatures of Paralogy Relationships. Plos computational biology, 9 (1). ISSN 1553-734X

Supek, Fran; Bošnjak, Matko; Škunca, Nives; Šmuc, Tomislav (2011) REVIGO summarizes and visualizes long lists of Gene Ontology terms. PLoS ONE, 6 (7). e21800/1-e21800/9. ISSN 1932-6203