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Theoretical Study of the Mechanism of the Formation of Azomethine Ylide from Isatine and Sarcosine and Its Reactivity in 1,3-Dipolar Cycloaddition Reaction with 7-Oxabenzonorbornadiene

Antol, Ivana; Štrbac, Petar; Murata, Yasujiro; Margetić, Davor (2024) Theoretical Study of the Mechanism of the Formation of Azomethine Ylide from Isatine and Sarcosine and Its Reactivity in 1,3-Dipolar Cycloaddition Reaction with 7-Oxabenzonorbornadiene. International Journal of Molecular Sciences, 25 (12). ISSN 1422-0067

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Abstract

The reaction mechanism of the formation of azomethine ylides from isatins and sarcosine is addressed in the literature in a general manner. This computational study aims to explore the mechanistic steps for this reaction in detail and to assess the reactivity of formed ylide in a 1,3-dipolar cycloaddition reaction with 7-oxabenzonorbornadiene. For this purpose, density functional theory (DFT) calculations at the M06-2X(SMD,EtOH)/6-31G(d,p) level were employed. The results indicate that CO2 elimination is the rate-determining step, the activation barrier for 1,3-dipolar cycloaddition is lower, and the formed ylide will readily react with dipolarophiles. The substitution of isatine with electron-withdrawal groups slightly decreases the activation barrier for ylide formation.

Item Type: Article
Uncontrolled Keywords: 1,3-dipolar cycloadditions; DFT calculations; isatine; azomethine ylide; reaction mechanism
Subjects: NATURAL SCIENCES > Chemistry
Divisions: Division of Organic Chemistry and Biochemistry
Projects:
Project titleProject leaderProject codeProject type
Prostorne modulacije gvanidinaDavor MargetićIP-2022-10-4385HRZZ
Depositing User: Ivana Vuglec
Date Deposited: 13 Oct 2025 08:39
URI: http://fulir.irb.hr/id/eprint/9997
DOI: 10.3390/ijms25126524

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